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Intron Name: Anas_platyrhynchos_platyrhynchos_1_151856390_151886877_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

151856390 - 151886877

Intron Length:

30488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

GTCACTTTGATG

Flanking Amino Acid:

PQGRAPACLQKMMRSSVFHM

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

67.7

37.5

Major BPS

0.85

0.9

39.9

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

38.3

-1.3

50.3

46.3

Minor BPS

54.7

1.4

55.39

40.5

Associated Gene:

Gene:

NALCN

Ensembl Gene ID:

ENSAPLG00000003120

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032563

151748952 - 151967465

218514

ENSAPLT00000022188

151748952 - 151967465

218514

ENSAPLT00000003194

151748952 - 151967465

218514