Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_152244987_152278350_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152244987 - 152278350

Intron Length:

33364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTCCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

AGTGACAAAATA

Flanking Amino Acid:

GLKKRRLRRQDPQLKGIVTR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

67.8

39.1

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

84.5

0.78

0.8

81.2

36.5

Minor 5ss

-2.5

2.9

33.4

41.7

Minor BPS

41.9

-0.6

52.38

39.5

Associated Gene:

Gene:

FGF14

Ensembl Gene ID:

ENSAPLG00000003780

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033000

152141212 - 152278543

137332