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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15241729_15242729_R

Intron Information:

Intron Rank:

133590

Intron Class:

major

Intron Phase:

Intron Coordinates:

15241729 - 15242729

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TCACCCATAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

74.4

0.55

0.7

72.9

25.4

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

49.7

-0.1

1.8

56.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019143

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029095

15241389 - 15243297

1909