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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152634191_152636084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152634191 - 152636084

Intron Length:

1894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

CPGGTTSSVIGVGAYVSPDM

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.5

39.1

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

33.4

-1.9

3.1

43.8

43.9

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

TPP2

Ensembl Gene ID:

ENSAPLG00000003791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003997

152623276 - 152670854

47579

ENSAPLT00000047209

152623276 - 152670048

46773

ENSAPLT00000046702

152623276 - 152671354

48079

ENSAPLT00000026825

152623276 - 152671627

48352