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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152636185_152636890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152636185 - 152636890

Intron Length:

706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTTAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTACCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TGTTTTTCAACA

Flanking Amino Acid:

NQYTWSSRGPSTDGALGVSI

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

30.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

78.6

0.64

0.9

70.7

39.8

Minor 5ss

40.5

-1.1

3.2

57.3

47.4

Minor BPS

0.53

1.5

75.9

35.2

Associated Gene:

Gene:

TPP2

Ensembl Gene ID:

ENSAPLG00000003791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046702

152623276 - 152671354

48079

ENSAPLT00000026825

152623276 - 152671627

48352

ENSAPLT00000003997

152623276 - 152670854

47579

ENSAPLT00000047209

152623276 - 152670048

46773