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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152639044_152640886_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152639044 - 152640886

Intron Length:

1843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATT

Flanking Amino Acid:

GIEPVFPENTENTERISLQL

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.8

0.67

77.1

37.1

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

78.1

0.96

86.75

33.6

Associated Gene:

Gene:

TPP2

Ensembl Gene ID:

ENSAPLG00000003791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026825

152623276 - 152671627

48352

ENSAPLT00000003997

152623276 - 152670854

47579

ENSAPLT00000047209

152623276 - 152670048

46773

ENSAPLT00000046702

152623276 - 152671354

48079