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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152641045_152641438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152641045 - 152641438

Intron Length:

394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTAAAA

5'SS Class:

major

3'SS Sequence:

CTTATTTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TGTATCTTATTT

Flanking Amino Acid:

GLREGVHYTEVCGYDTATPN

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

71.5

33.3

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

0.67

80.4

Minor 5ss

38.9

-1.2

2.8

48.9

46.9

Minor BPS

61.2

0.43

1.6

77.02

39.7

Associated Gene:

Gene:

TPP2

Ensembl Gene ID:

ENSAPLG00000003791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047209

152623276 - 152670048

46773

ENSAPLT00000046702

152623276 - 152671354

48079

ENSAPLT00000026825

152623276 - 152671627

48352

ENSAPLT00000003997

152623276 - 152670854

47579