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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152646332_152647570_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152646332 - 152647570

Intron Length:

1239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

GAAAGCATAACT

Flanking Amino Acid:

VLCATPQLNMHASEGIVRFD

Intron Amino Acid Position:

789

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

66.3

0.41

37.5

Major PPT

83.2

0.75

0.7

29.2

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

47.5

-0.1

2.1

65.27

44.1

Associated Gene:

Gene:

TPP2

Ensembl Gene ID:

ENSAPLG00000003791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003997

152623276 - 152670854

47579

ENSAPLT00000047209

152623276 - 152670048

46773

ENSAPLT00000046702

152623276 - 152671354

48079

ENSAPLT00000026825

152623276 - 152671627

48352