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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152649216_152649478_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152649216 - 152649478

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTATTTTGAACT

Flanking Amino Acid:

EMILTYNFHQPKSGEVTPSC

Intron Amino Acid Position:

855

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

81.9

32.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

86.7

0.82

0.6

83.7

24.6

Minor 5ss

-0.9

3.5

64.1

47.4

Minor BPS

65.4

0.56

1.4

78.22

37.7

Associated Gene:

Gene:

TPP2

Ensembl Gene ID:

ENSAPLG00000003791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047209

152623276 - 152670048

46773

ENSAPLT00000046702

152623276 - 152671354

48079

ENSAPLT00000026825

152623276 - 152671627

48352

ENSAPLT00000003997

152623276 - 152670854

47579