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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152649617_152651124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152649617 - 152651124

Intron Length:

1508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGAGT

5'SS Class:

major

3'SS Sequence:

TTCTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTACAATAACT

Flanking Amino Acid:

MGSGDAYPHQYSVKLEKGDY

Intron Amino Acid Position:

901

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

66.9

44.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

93.2

0.97

0.6

92.2

18.2

Minor 5ss

32.3

-2

3.5

48.9

46.9

Minor BPS

63.2

0.49

1.9

87.65

36.7

Associated Gene:

Gene:

TPP2

Ensembl Gene ID:

ENSAPLG00000003791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046702

152623276 - 152671354

48079

ENSAPLT00000026825

152623276 - 152671627

48352

ENSAPLT00000003997

152623276 - 152670854

47579

ENSAPLT00000047209

152623276 - 152670048

46773