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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152651370_152651563_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152651370 - 152651563

Intron Length:

194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TAGTTTTTAACA

Flanking Amino Acid:

PFFVTSLPDDKIPKGAGPGC

Intron Amino Acid Position:

982

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

0.65

76.9

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

74.5

0.76

1.1

75.73

35.7

Associated Gene:

Gene:

TPP2

Ensembl Gene ID:

ENSAPLG00000003791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047209

152623276 - 152670048

46773

ENSAPLT00000046702

152623276 - 152671354

48079

ENSAPLT00000026825

152623276 - 152671627

48352

ENSAPLT00000003997

152623276 - 152670854

47579