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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152661867_152668082_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

152661867 - 152668082

Intron Length:

6216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

ACAAAAACTCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCGTAAA

U12 Branch Point Sequence:

CTTGCCACAAAA

Flanking Amino Acid:

TKWTDLFDSKEALLRKKCCQ

Intron Amino Acid Position:

1217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

62.6

0.31

1.2

63.9

40.2

Major PPT

50.4

0.01

38.2

38.9

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

46.8

-0.2

61.94

43.8

Associated Gene:

Gene:

TPP2

Ensembl Gene ID:

ENSAPLG00000003791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047209

152623276 - 152670048

46773