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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152661867_152670028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152661867 - 152670028

Intron Length:

8162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCACATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTTGTTTTCACA

Flanking Amino Acid:

TKWTDLFDSKVLTFAYKHAL

Intron Amino Acid Position:

1217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

76.7

0.6

0.8

34.1

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

58.6

0.26

1.8

73.92

38.7

Associated Gene:

Gene:

TPP2

Ensembl Gene ID:

ENSAPLG00000003791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046702

152623276 - 152671354

48079

ENSAPLT00000026825

152623276 - 152671627

48352

ENSAPLT00000003997

152623276 - 152670854

47579