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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152670149_152670764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152670149 - 152670764

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTGTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TCGTGTTTATTT

Flanking Amino Acid:

TKDNLKNCIQLMKLLGWTHC

Intron Amino Acid Position:

1257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.2

31.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.3

0.7

0.9

81.5

35.9

Minor 5ss

39.4

-1.2

3.3

56.7

47.6

Minor BPS

48.9

-0

66.59

45.3

Associated Gene:

Gene:

TPP2

Ensembl Gene ID:

ENSAPLG00000003791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046702

152623276 - 152671354

48079

ENSAPLT00000026825

152623276 - 152671627

48352

ENSAPLT00000003997

152623276 - 152670854

47579