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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152714835_152715856_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152714835 - 152715856

Intron Length:

1022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAAAT

U12 Branch Point Sequence:

AAATCACTACTT

Flanking Amino Acid:

LTDSVLETMGRVSLDMMSVQ

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.5

34.4

Major BPS

0.1

59.7

32.6

Major PPT

86.5

0.82

0.7

81.2

23.9

Minor 5ss

32.6

-2

3.5

48.1

47.5

Minor BPS

44.6

-0.3

2.1

62.8

40.8

Associated Gene:

Gene:

POGLUT2

Ensembl Gene ID:

ENSAPLG00000004596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004736

152712355 - 152724230

11876