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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152720486_152722034_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152720486 - 152722034

Intron Length:

1549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTGGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TACTTTTTAAGT

Flanking Amino Acid:

FVLALDAQGRRFTSSPGENT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

76.1

39.5

Major BPS

87.3

0.93

0.8

36.5

Major PPT

64.5

0.33

1.1

62.4

39.1

Minor 5ss

32.6

-2

3.1

40.4

45.5

Minor BPS

63.7

0.51

1.6

75.92

41.3

Associated Gene:

Gene:

POGLUT2

Ensembl Gene ID:

ENSAPLG00000004596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004736

152712355 - 152724230

11876