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Intron Name: Anas_platyrhynchos_platyrhynchos_1_152755575_152756907_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152755575 - 152756907

Intron Length:

1333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAT

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

ACTGTTTTATTT

Flanking Amino Acid:

PVMKQLNLQQTQLRIDSFFR

Intron Amino Acid Position:

943

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

32.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

79.1

0.66

0.9

81.4

36.1

Minor 5ss

37.8

-1.4

3.5

49.2

Minor BPS

49.6

0.05

1.6

64.63

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005161

152743194 - 152757576

14383