Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_152846327_152847495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

152846327 - 152847495

Intron Length:

1169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCCAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGATAT

U12 Branch Point Sequence:

TTTTTTTTTACA

Flanking Amino Acid:

DAIVLPYNSIGLSLVALIIP

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

62.9

Major BPS

55.3

0.13

1.2

52.8

42.9

Major PPT

98.8

1.1

0.5

95.2

16.3

Minor 5ss

31.9

-2.1

35.2

42.4

Minor BPS

71.2

0.66

1.5

82.45

31.9

Associated Gene:

Gene:

SLC10A2

Ensembl Gene ID:

ENSAPLG00000005282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005461

152842081 - 152852936

10856