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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15305941_15307806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15305941 - 15307806

Intron Length:

1866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

CTGTGCTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

AGTTACTGAATT

Flanking Amino Acid:

LFRNRFEVRNTVKLLQGADL

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

77.3

37.6

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

79.2

0.66

0.9

72.8

37.5

Minor 5ss

39.3

-1.2

2.8

53.1

38.8

Minor BPS

61.9

0.45

1.6

77.67

38.2

Associated Gene:

Gene:

TRMU

Ensembl Gene ID:

ENSAPLG00000016380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017101

15302664 - 15313408

10745