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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15308960_15309423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15308960 - 15309423

Intron Length:

464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTATTTGGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

TGTGACTTAAAT

Flanking Amino Acid:

ERNFKKFLLEYLEPRPGNFV

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.6

22.3

Major BPS

0.5

1.1

76.9

32.8

Major PPT

0.47

68.8

36.9

Minor 5ss

30.6

-2.2

2.6

35.8

41.1

Minor BPS

62.2

0.46

1.8

79.4

Associated Gene:

Gene:

TRMU

Ensembl Gene ID:

ENSAPLG00000016380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017101

15302664 - 15313408

10745