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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15309491_15309989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15309491 - 15309989

Intron Length:

499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAAGAT

U12 Branch Point Sequence:

ATGCTAGCAACA

Flanking Amino Acid:

EDKKVLGTHKGWFLYTIGQR

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

72.5

37.5

Major BPS

50.8

0.02

1.1

47.1

36.1

Major PPT

81.6

0.71

0.8

80.2

31.9

Minor 5ss

33.1

-1.9

3.2

44.4

43.3

Minor BPS

40.2

-0.7

2.2

52.37

39.3

Associated Gene:

Gene:

TRMU

Ensembl Gene ID:

ENSAPLG00000016380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017101

15302664 - 15313408

10745