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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15311684_15311936_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15311684 - 15311936

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAATCAAA

5'SS Class:

major

3'SS Sequence:

TTTTCTGCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAC

U12 Branch Point Sequence:

TGTTTGGCCATT

Flanking Amino Acid:

HFRFQHQMALVPCVLTLNQD

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

40.2

Major BPS

64.1

0.35

1.2

67.6

36.5

Major PPT

85.1

0.79

0.8

77.5

36.9

Minor 5ss

38.3

-1.3

2.8

40.4

45.5

Minor BPS

35.3

-1

2.7

59.72

44.5

Associated Gene:

Gene:

TRMU

Ensembl Gene ID:

ENSAPLG00000016380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017101

15302664 - 15313408

10745