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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15331633_15332670_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15331633 - 15332670

Intron Length:

1038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGGAGA

5'SS Class:

major

3'SS Sequence:

TTTTCTCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATTCACT

Flanking Amino Acid:

STATRATLLTRSLNCNNTYI

Intron Amino Acid Position:

2587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

42.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

91.1

0.92

0.6

89.5

19.1

Minor 5ss

34.5

-1.8

3.3

49.5

46.5

Minor BPS

63.6

0.51

2.1

85.11

41.3

Associated Gene:

Gene:

CELSR1

Ensembl Gene ID:

ENSAPLG00000016414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017137

15328394 - 15483334

154941