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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15342483_15347128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15342483 - 15347128

Intron Length:

4646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GCAATTTTAATT

Flanking Amino Acid:

LIGINQTDNPFVCTVIAILL

Intron Amino Acid Position:

2382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

79.3

34.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.2

0.79

0.7

80.4

24.9

Minor 5ss

36.8

-1.5

3.6

57.2

46.9

Minor BPS

58.2

0.33

1.3

65.44

39.6

Associated Gene:

Gene:

CELSR1

Ensembl Gene ID:

ENSAPLG00000016414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017137

15328394 - 15483334

154941