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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15350481_15350806_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15350481 - 15350806

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATTTTTGTGATT

Flanking Amino Acid:

ENYDPDRRSLRLPNRPIINT

Intron Amino Acid Position:

2216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

85.4

0.8

0.7

80.4

24.8

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

52.4

0.15

75.74

35.5

Associated Gene:

Gene:

CELSR1

Ensembl Gene ID:

ENSAPLG00000016414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017137

15328394 - 15483334

154941