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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15354718_15357313_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15354718 - 15357313

Intron Length:

2596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGCG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TGCCTCATAATT

Flanking Amino Acid:

AATRDVEFNENIIKVGSALL

Intron Amino Acid Position:

2046

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

72.5

37.3

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

82.7

0.73

0.8

80.4

31.6

Minor 5ss

30.7

-2.2

3.3

39.2

46.2

Minor BPS

55.1

0.24

1.6

70.74

40.3

Associated Gene:

Gene:

CELSR1

Ensembl Gene ID:

ENSAPLG00000016414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017137

15328394 - 15483334

154941