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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15358407_15360166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15358407 - 15360166

Intron Length:

1760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TGTTATTTACTT

Flanking Amino Acid:

AAVPCPKGSVGNAVRHCNIE

Intron Amino Acid Position:

1944

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

84.1

0.77

0.8

81.8

30.2

Minor 5ss

-1

2.7

45.9

42.3

Minor BPS

58.1

0.33

1.8

77.31

39.6

Associated Gene:

Gene:

CELSR1

Ensembl Gene ID:

ENSAPLG00000016414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017137

15328394 - 15483334

154941