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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15389925_15392737_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15389925 - 15392737

Intron Length:

2813

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CCTGCCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

GTTGCACTGACT

Flanking Amino Acid:

EEQIQLTFSAGETTTTVAPF

Intron Amino Acid Position:

1368

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.8

38.1

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

76.3

0.59

0.8

31.5

Minor 5ss

40.1

-1.1

3.1

55.9

48.3

Minor BPS

49.1

0.01

2.1

74.36

42.1

Associated Gene:

Gene:

CELSR1

Ensembl Gene ID:

ENSAPLG00000016414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017137

15328394 - 15483334

154941