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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15417214_15480144_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15417214 - 15480144

Intron Length:

62931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

CGGTCCCTGACA

Flanking Amino Acid:

LEALMKVSVSDGVHSVTAVC

Intron Amino Acid Position:

1064

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

91.5

0.93

0.6

89.8

18.5

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

56.2

0.19

1.7

63.96

42.3

Associated Gene:

Gene:

CELSR1

Ensembl Gene ID:

ENSAPLG00000016414

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017137

15328394 - 15483334

154941