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Intron Name: Anas_platyrhynchos_platyrhynchos_1_154564094_154570576_R

Intron Information:

Intron Rank:

134411

Intron Class:

major

Intron Phase:

Intron Coordinates:

154564094 - 154570576

Intron Length:

6483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTTTCCCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

83.9

0.76

0.6

78.2

30.7

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

44.1

-0.4

3.6

72.92

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019571

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029093

154562663 - 154571560

8898