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Intron Name: Anas_platyrhynchos_platyrhynchos_1_154705369_154707693_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
154705369 - 154707693

Intron Length:
2325

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAACGCTC

5'SS Class:
major

3'SS Sequence:
TCCTCCCGTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTAAC

U12 Branch Point Sequence:
TTATACTTTACT

Flanking Amino Acid:
AELAAQKAREEEERAKREEL

Intron Amino Acid Position:
195

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.9
0.61
1.2
67.8
43.5

Major BPS
76.8
0.67
0.9
75.9
25

Major PPT
71.2
0.48
0.8
69.5
31.2

Minor 5ss
40.9
-1
3.4
59.1
45.6

Minor BPS
67.6
0.64
1.8
86.43
38.8

Associated Gene:

Gene:
ARGLU1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

154703842 - 154712385
8544