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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15546439_15554158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15546439 - 15554158

Intron Length:

7720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

GTCTGTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

TCTGTCTTACAG

Flanking Amino Acid:

TRDNEELRDPAGPGTIIMAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

79.3

0.66

0.9

72.1

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

48.5

-0.2

1.9

55.39

46.1

Associated Gene:

Gene:

GRAMD4

Ensembl Gene ID:

ENSAPLG00000002925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034407

15540718 - 15596834

56117

ENSAPLT00000020154

15521632 - 15596834

75203

ENSAPLT00000003013

15544875 - 15596834

51960

ENSAPLT00000046780

15521632 - 15596834

75203

ENSAPLT00000037161

15521632 - 15596834

75203