Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_155672624_155672718_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

155672624 - 155672718

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

CTTCATTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TATATTTGAAGT

Flanking Amino Acid:

ETGYFFIYGQVLYTDTTFAM

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

78.4

0.64

0.8

73.5

31.1

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

0.08

1.7

70.23

40.7

Associated Gene:

Gene:

TNFSF13B

Ensembl Gene ID:

ENSAPLG00000008693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031716

155657615 - 155674790

17176

ENSAPLT00000009058

155663267 - 155698595

35329