About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_155704352_155704919_F


Intron Information:

Intron Rank:
124170

Intron Class:
major

Intron Phase:

Intron Coordinates:
155704352 - 155704919

Intron Length:
568

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGGTTG

5'SS Class:
strong_major

3'SS Sequence:
TACTCCATTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTACAAT

U12 Branch Point Sequence:
CCTTCTGTACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.5
0.72
1
70.4
42.5

Major BPS
65.2
0.38
1.3
73.4
38.5

Major PPT
76.9
0.61
0.9
70.3
34.5

Minor 5ss
38.9
-1.2
3.6
54.5
49.7

Minor BPS
45.7
-0.3
2.2
56.67
43.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

155704135 - 155706909
2775