Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_155768379_155769288_F

Intron Information:

Intron Rank:

130850

Intron Class:

major

Intron Phase:

Intron Coordinates:

155768379 - 155769288

Intron Length:

910

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TGAATACCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGAAT

U12 Branch Point Sequence:

TTTCCTTGAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

93.3

21.1

Major BPS

62.3

0.31

1.4

73.3

39.1

Major PPT

64.3

0.32

59.6

41.6

Minor 5ss

-1

59.7

44.8

Minor BPS

68.7

0.58

1.3

77.76

32.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019263

155738100 - 155769537

31438