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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15585346_15586805_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15585346 - 15586805

Intron Length:

1460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTGC

5'SS Class:

major

3'SS Sequence:

GCTTTTTATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGGATTTAATT

Flanking Amino Acid:

LVLDVAQKAQNLFGKMADIL

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

59.4

40.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.5

0.71

0.9

36.2

Minor 5ss

43.2

-0.7

3.1

59.3

45.4

Minor BPS

61.4

0.44

1.6

76.19

41.2

Associated Gene:

Gene:

GRAMD4

Ensembl Gene ID:

ENSAPLG00000002925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037161

15521632 - 15596834

75203

ENSAPLT00000034407

15540718 - 15596834

56117

ENSAPLT00000020154

15521632 - 15596834

75203

ENSAPLT00000003013

15544875 - 15596834

51960

ENSAPLT00000046780

15521632 - 15596834

75203