Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_15591639_15592197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15591639 - 15592197

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGATC

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATTT

Flanking Amino Acid:

KSWMLSGHEKLQTAASRSYV

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

78.6

35.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.6

0.96

0.7

88.6

28.1

Minor 5ss

42.9

-0.8

3.1

59.7

45.1

Minor BPS

64.7

0.54

1.5

79.8

36.8

Associated Gene:

Gene:

GRAMD4

Ensembl Gene ID:

ENSAPLG00000002925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034407

15540718 - 15596834

56117

ENSAPLT00000046780

15521632 - 15596834

75203