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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15594079_15595631_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15594079 - 15595631

Intron Length:

1553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTGGTCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGATAT

U12 Branch Point Sequence:

TATGAGCTATCT

Flanking Amino Acid:

KLTDITDIQKYKVLSVLPGS

Intron Amino Acid Position:

541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

56.3

0.16

1.2

42.8

Major PPT

83.6

0.76

0.9

36.6

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

38.9

-0.7

2.5

62.8

46.6

Associated Gene:

Gene:

GRAMD4

Ensembl Gene ID:

ENSAPLG00000002925

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037161

15521632 - 15596834

75203

ENSAPLT00000034407

15540718 - 15596834

56117

ENSAPLT00000020154

15521632 - 15596834

75203

ENSAPLT00000003013

15544875 - 15596834

51960

ENSAPLT00000046780

15521632 - 15596834

75203