Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_156383093_156384491_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

156383093 - 156384491

Intron Length:

1399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTCT

5'SS Class:

major

3'SS Sequence:

TTCTGTCACCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTCTGTCACC

Flanking Amino Acid:

ENHKNAFEISGNMIERILVS

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

67.6

37.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

69.3

0.43

0.9

62.5

38.9

Minor 5ss

45.5

-0.5

3.1

65.8

45.4

Minor BPS

55.3

0.15

2.4

77.59

Associated Gene:

Gene:

ARHGEF7

Ensembl Gene ID:

ENSAPLG00000001023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033395

156358902 - 156465474

106573

ENSAPLT00000029107

156358902 - 156465474

106573

ENSAPLT00000018475

156358902 - 156465474

106573

ENSAPLT00000001182

156358902 - 156430678

71777

ENSAPLT00000034806

156358902 - 156465474

106573