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Intron Name: Anas_platyrhynchos_platyrhynchos_1_156614650_156617150_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

156614650 - 156617150

Intron Length:

2501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATGAC

5'SS Class:

major

3'SS Sequence:

CTTGTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

ATGAGAGTAACA

Flanking Amino Acid:

NLAAFGIHIKDRSAVSTWEI

Intron Amino Acid Position:

558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

69.1

36.1

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

83.1

0.74

0.8

77.4

31.4

Minor 5ss

30.9

-2.2

3.5

42.4

45.1

Minor BPS

41.1

-0.6

2.4

55.53

43.2

Associated Gene:

Gene:

CARS2

Ensembl Gene ID:

ENSAPLG00000006716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006973

156583361 - 156617319

33959