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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15663809_15667965_R

Intron Information:

Intron Rank:

138142

Intron Class:

major

Intron Phase:

Intron Coordinates:

15663809 - 15667965

Intron Length:

4157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCTTC

5'SS Class:

major

3'SS Sequence:

TTTCTGTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TAATTGTTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

0.9

35.7

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

84.4

0.77

0.8

79.4

32.6

Minor 5ss

43.1

-0.8

55.7

43.3

Minor BPS

51.6

0.03

2.1

65.45

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047579

15663676 - 15669065

5390