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Intron Name: Anas_platyrhynchos_platyrhynchos_1_156696619_156719884_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

156696619 - 156719884

Intron Length:

23266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCGTGGG

5'SS Class:

major

3'SS Sequence:

AAACCTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAC

U12 Branch Point Sequence:

TTGTGTTTAAAC

Flanking Amino Acid:

PYNISIWDTAGREQFHGLGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.4

58.2

46.8

Major BPS

72.4

0.56

79.3

29.5

Major PPT

62.4

0.28

1.1

54.6

44.7

Minor 5ss

26.4

-2.7

3.1

32.5

42.1

Minor BPS

59.6

0.28

1.9

71.11

40.5

Associated Gene:

Gene:

RAB20

Ensembl Gene ID:

ENSAPLG00000011744

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012218

156696447 - 156720405

23959