Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_156731233_156732131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

156731233 - 156732131

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAGAGGTG

5'SS Class:

major

3'SS Sequence:

CCTTTTACCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

TCCCCTTTTACC

Flanking Amino Acid:

TGSPGDPGLQGQPGRPGSPG

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.6

0.3

1.3

60.9

Major BPS

0.42

1.3

60.1

46.3

Major PPT

67.8

0.4

72.1

31.4

Minor 5ss

-3.5

4.4

27.3

44.4

Minor BPS

56.5

0.19

1.7

63.7

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009462

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025814

156727405 - 156738603

11199