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Intron Name: Anas_platyrhynchos_platyrhynchos_1_156733910_156741681_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

156733910 - 156741681

Intron Length:

7772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGAAAG

5'SS Class:

major

3'SS Sequence:

ACAGGCTATCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

GTGCTCTAAACA

Flanking Amino Acid:

KGDIGAKGTTGLQGQPGVPA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

0.9

69.4

36.6

Major BPS

0.57

73.6

28.6

Major PPT

58.6

0.19

1.1

47.4

44.4

Minor 5ss

33.5

-1.9

2.8

46.4

Minor BPS

56.1

0.19

1.7

65.03

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009462

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044042

156733529 - 156744920

11392