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Intron Name: Anas_platyrhynchos_platyrhynchos_1_156743015_156744097_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

156743015 - 156744097

Intron Length:

1083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

CTTTCTTTAAAG

Flanking Amino Acid:

SGMDGFPGDKGLKGSPGIDG

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

80.7

0.69

27.2

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

71.4

0.53

1.5

72.3

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009462

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028290

156742776 - 156776142

33367