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Intron Name: Anas_platyrhynchos_platyrhynchos_1_15691696_15696238_R

Intron Information:

Intron Rank:

148293

Intron Class:

major

Intron Phase:

Intron Coordinates:

15691696 - 15696238

Intron Length:

4543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CCATCCCTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

84.3

0.77

0.9

81.2

36.5

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

48.7

-0

65.1

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030626

15691113 - 15696312

5200