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Intron Name: Anas_platyrhynchos_platyrhynchos_1_156960234_156963388_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

156960234 - 156963388

Intron Length:

3155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGGCCTCA

5'SS Class:

weak_major

3'SS Sequence:

ATCAATTGAAAAG|T

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTCTTTATTT

Flanking Amino Acid:

PELDAALQLIGQLMTFEF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.6

0.04

1.2

49.3

38.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

49.3

-0

1.2

49.1

42.2

Minor 5ss

44.5

-0.6

3.1

55.5

43.5

Minor BPS

76.2

0.9

1.4

91.47

32.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026038

156960210 - 156967602

7393