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Intron Name: Anas_platyrhynchos_platyrhynchos_1_156963597_156967438_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

156963597 - 156967438

Intron Length:

3842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCACAGG

5'SS Class:

weak_major

3'SS Sequence:

CAAGATCTCAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAGCAT

U12 Branch Point Sequence:

TCTTCTGGAAAC

Flanking Amino Acid:

EGTPGKDGLPDSHLCLPTGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.09

1.4

47.9

Major BPS

55.5

0.14

1.4

40.9

Major PPT

50.6

0.01

1.1

48.1

38.8

Minor 5ss

32.5

-2

40.7

45.1

Minor BPS

47.6

-0.2

2.2

64.08

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026038

156960210 - 156967602

7393