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Intron Name: Anas_platyrhynchos_platyrhynchos_1_156968094_156974105_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

156968094 - 156974105

Intron Length:

6012

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCTGCCGG

5'SS Class:

weak_major

3'SS Sequence:

ACGGGTAGTCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCTAG

U12 Branch Point Sequence:

AGAACCTGGAAG

Flanking Amino Acid:

PGVPGSVGLPGLSGDKGEKG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.9

0.23

1.3

41.9

44.4

Major BPS

45.1

-0.3

1.7

47.8

45.7

Major PPT

54.6

0.1

1.1

43.5

Minor 5ss

28.6

-2.5

3.8

35.8

42.9

Minor BPS

45.2

-0.5

1.7

45.6

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025114

156967036 - 156997555

30520