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Intron Name: Anas_platyrhynchos_platyrhynchos_1_156977473_156977550_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

156977473 - 156977550

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTTAATCAA

5'SS Class:

weak_major

3'SS Sequence:

TCTCAGAGACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

TATTGCATATCC

Flanking Amino Acid:

GNYSSLVLISAKAVLHRQLG

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.3

52.9

39.6

Major BPS

0.52

1.5

79.6

35.6

Major PPT

56.3

0.14

1.1

43.5

Minor 5ss

32.2

-2

2.9

43.4

43.6

Minor BPS

48.6

-0.1

2.2

68.65

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025114

156967036 - 156997555

30520